Comparing
padix-key:rust-list
(bf57a90
) withrust
(2e5ef85
)-54%
- Improvement
- 21
- Regression
- 3
- Untouched
- 73
- New
- 3
- Skipped
- 1
Different runtime environments detected
Some benchmarks with significant performance changes were compared across different runtime environments, which may affect the accuracy of the results. Learn more about regression causes.Benchmarks
101 total
benchmark_find_connected
benchmarks/structure/benchmark_bonds.py-32%
307.3 µs452.5 µs
benchmark_conversion[as_graph]
benchmarks/structure/benchmark_bonds.py-26%
8.7 ms11.7 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+10%
110 ms100.1 ms
benchmark_conversion[adjacency_matrix]
benchmarks/structure/benchmark_bonds.py+9%
1.4 ms1.3 ms
benchmark_lddt[False-all]
benchmarks/structure/benchmark_compare.py+8%
227.1 ms209.6 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py+7%
312.2 ms291.6 ms
benchmark_conversion[as_array]
benchmarks/structure/benchmark_bonds.py+7%
116.1 µs108.8 µs
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py+7%
318.3 ms298.2 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py+7%
323.6 ms303.5 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py+6%
7 ms6.6 ms
benchmark_align_pairwise[align_optimal]
benchmarks/sequence/align/benchmark_pairwise.py+6%
381.5 ms361 ms
benchmark_align_multiple
benchmarks/sequence/align/benchmark_multiple.py+6%
20.2 s19.2 s
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py+4%
10 ms9.6 ms
benchmark_get_sequences[fasta_path0-NucleotideSequence]
benchmarks/sequence/benchmark_fasta.py+3%
184.6 ms178.4 ms
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py+3%
2 s1.9 s
benchmark_get_a3m_alignments
benchmarks/sequence/benchmark_fasta.py+3%
576.5 ms560 ms
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+3%
2 s1.9 s
benchmark_get_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py+3%
18.3 ms17.9 ms
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+2%
541.7 µs529.5 µs
benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+2%
623.8 µs609.9 µs
benchmark_create_kmers
benchmarks/sequence/align/benchmark_kmer.py+2%
233.1 µs228.2 µs
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+2%
186 µs182.1 µs
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py+2%
14.5 ms14.2 ms
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py+2%
885 ms867.3 ms
benchmark_align_pairwise[align_banded]
benchmarks/sequence/align/benchmark_pairwise.py+2%
28.7 ms28.1 ms
Commits
Click on a commit to change the comparison rangeBase
main
2e5ef85
-54.3%
Fix lint
bf57a90
14 days ago
by padix-key