Benchmarks
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
147
8.9 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]created
4 months ago
, last run2 hours ago
0
147
11.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
150
8.9 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[None-KmerTable]created
4 months ago
, last run2 hours ago
0
150
11.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
147
9.7 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]created
4 months ago
, last run2 hours ago
0
147
12.2 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
150
9.7 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[None-KmerTable]created
4 months ago
, last run2 hours ago
0
150
12.1 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
147
13.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]created
4 months ago
, last run2 hours ago
0
147
15.8 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]created
4 months ago
, last run2 hours ago
0
150
8.8 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[None-KmerTable]created
4 months ago
, last run2 hours ago
0
150
10.1 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_kmer_decomposition[11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
183.2 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_kmer_decomposition[None]created
4 months ago
, last acknowledgement17 days ago
1
150
193.5 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
620.3 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[BucketKmerTable(10000)-None]created
4 months ago
, last run2 hours ago
0
147
583.7 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[KmerTable-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
535.9 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[KmerTable-None]created
4 months ago
, last run2 hours ago
0
150
495.9 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
546.7 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[BucketKmerTable(10000)-None]created
4 months ago
, last run2 hours ago
0
147
547.7 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
456 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[KmerTable-None]created
4 months ago
, last run2 hours ago
0
150
458 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
13.7 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_table[BucketKmerTable(10000)-None]created
4 months ago
, last run2 hours ago
0
147
13.8 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_table[KmerTable-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
15 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_table[KmerTable-None]created
4 months ago
, last run2 hours ago
0
150
15.2 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_score_threshold_rule[11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
2.2 s
benchmarks/sequence/align/benchmark_kmers.py::benchmark_score_threshold_rule[None]created
4 months ago
, last run2 hours ago
0
150
2.2 s
benchmarks/sequence/align/benchmark_kmers.py::test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
7.2 ms
benchmarks/sequence/align/benchmark_kmers.py::test_pickle_and_unpickle[BucketKmerTable(10000)-None]created
4 months ago
, last run2 hours ago
0
147
7.2 ms
benchmarks/sequence/align/benchmark_kmers.py::test_pickle_and_unpickle[KmerTable-11*11*1*1***111]created
4 months ago
, last run2 hours ago
0
147
38.5 ms
benchmarks/sequence/align/benchmark_kmers.py::test_pickle_and_unpickle[KmerTable-None]created
4 months ago
, last run2 hours ago
0
150
38.6 ms
benchmarks/structure/benchmark_alphabet.py::benchmark_structural_alphabet_methods[to_3di]created
2 months ago
, last run2 hours ago
0
92
13.5 ms
benchmarks/structure/benchmark_alphabet.py::benchmark_structural_alphabet_methods[to_protein_blocks]created
2 months ago
, last acknowledgement17 days ago
1
92
84 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[False-all]created
2 months ago
, last run2 hours ago
0
7
214.2 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[False-atom]created
2 months ago
, last run2 hours ago
0
7
295.4 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[False-chain]created
2 months ago
, last run2 hours ago
0
7
301.5 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[False-residue]created
2 months ago
, last run2 hours ago
0
7
306.9 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[True-all]created
2 months ago
, last run2 hours ago
0
7
904.6 ms
benchmarks/structure/benchmark_compare.py::benchmark_lddt[True-atom]created
2 months ago
, last run2 hours ago
0
7
1.9 s
benchmarks/structure/benchmark_compare.py::benchmark_lddt[True-chain]created
2 months ago
, last run2 hours ago
0
7
1.9 s
benchmarks/structure/benchmark_compare.py::benchmark_lddt[True-residue]created
2 months ago
, last run2 hours ago
0
7
1.9 s
benchmarks/structure/benchmark_pdbx.py::benchmark_compresscreated
3 months ago
, last acknowledgement3 months ago
1
131
578.6 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_deserialize_pdbx[bcif]created
4 months ago
, last run2 hours ago
0
182
101.3 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_deserialize_pdbx[cif]created
4 months ago
, last run2 hours ago
0
182
93.4 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_get_structure[bcif-False]created
4 months ago
, last run2 hours ago
0
180
19.6 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_get_structure[bcif-True]created
4 months ago
, last run2 hours ago
0
180
75.3 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_get_structure[cif-False]created
4 months ago
, last acknowledgement2 months ago
1
180
51.6 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_get_structure[cif-True]created
4 months ago
, last acknowledgement2 months ago
1
180
106.9 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_serialize_pdbx[bcif]created
4 months ago
, last run2 hours ago
0
182
74.8 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_serialize_pdbx[cif]created
4 months ago
, last run2 hours ago
0
182
169.9 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_set_structure[bcif-False]created
4 months ago
, last acknowledgement4 months ago
1
180
10.7 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_set_structure[bcif-True]created
4 months ago
, last acknowledgement17 days ago
1
180
52.2 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_set_structure[cif-False]created
4 months ago
, last run2 hours ago
0
180
98.5 ms
benchmarks/structure/benchmark_pdbx.py::benchmark_set_structure[cif-True]created
4 months ago
, last acknowledgement17 days ago
1
180
143.5 ms
benchmarks/structure/benchmark_superimpose.py::benchmark_superimpose[superimpose]created
2 months ago
, last run2 hours ago
0
6
2.7 ms
benchmarks/structure/benchmark_superimpose.py::benchmark_superimpose[superimpose_homologs]created
2 months ago
, last run2 hours ago
0
6
101.7 ms
benchmarks/structure/benchmark_superimpose.py::benchmark_superimpose[superimpose_structural_homologs]created
2 months ago
, last run2 hours ago
0
6
41.3 ms
benchmarks/structure/benchmark_superimpose.py::benchmark_superimpose[superimpose_without_outliers]created
2 months ago
, last run2 hours ago
0
6
16.5 ms