Avatar for the biotite-dev user
biotite-dev
biotite
BlogDocsChangelog
98 total
benchmark_create_kmers
benchmarks/sequence/align/benchmark_kmer.py::benchmark_create_kmerscreated
2 months ago
, last runago
225.5 µs
benchmark_similar_kmers
benchmarks/sequence/align/benchmark_kmer.py::benchmark_similar_kmerscreated
2 months ago
, last runago
319.1 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]created
2 years ago
, last runago
10.2 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]created
2 years ago
, last runago
13.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]created
2 years ago
, last runago
9.2 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]created
2 years ago
, last runago
12.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]created
2 years ago
, last runago
9.1 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmer_selection[None-KmerTable]created
2 years ago
, last runago
12.3 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]created
2 years ago
, last runago
10.1 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_kmers[None-KmerTable]created
2 years ago
, last runago
13.2 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]created
2 years ago
, last runago
14.5 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]created
2 years ago
, last runago
17.6 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]created
2 years ago
, last runago
9.5 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_indexing_from_sequences[None-KmerTable]created
2 years ago
, last runago
12.6 ms
benchmarks/sequence/align/benchmark_kmers.py::benchmark_kmer_decomposition[11*11*1*1***111]created
2 years ago
, last runago
185 µs
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py::benchmark_kmer_decomposition[None]created
2 years ago
, last runago
135 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]created
2 years ago
, last runago
624.1 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[BucketKmerTable(10000)-None]created
2 years ago
, last runago
576.2 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]created
2 years ago
, last runago
538.4 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[BucketKmerTable(10000)-None]created
2 years ago
, last runago
540.5 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]created
2 years ago
, last runago
457.7 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_kmer_selection[KmerTable-None]created
2 years ago
, last runago
460.4 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[KmerTable-11*11*1*1***111]created
2 years ago
, last runago
543 µs
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match[KmerTable-None]created
2 years ago
, last runago
494.3 µs
benchmarks/sequence/align/benchmark_kmers.py::benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]created
2 years ago
, last runago
12.9 ms
© 2026 CodSpeed Technology
Home Terms Privacy Docs