Comparing
padix-key:rust-bond-type-fix
(845510e
) withrust
(2e5ef85
)-54%
- Improvement
- 22
- Regression
- 3
- Untouched
- 72
- New
- 3
- Skipped
- 1
No successful run was found on rust ( d97c654) during the generation of this report, so main ( 2e5ef85) was used instead as the comparison base. There might be some changes unrelated to this pull request in this report.
Different runtime environments detected
Some benchmarks with significant performance changes were compared across different runtime environments, which may affect the accuracy of the results. Learn more about regression causes.Benchmarks
101 total
benchmark_connect[connect_via_residue_names]
benchmarks/structure/benchmark_bonds.py×12
50.6 ms4.3 ms
benchmark_connect[connect_via_distances]
benchmarks/structure/benchmark_bonds.py×10
26.1 ms2.6 ms
benchmark_get_structure_with_bonds
benchmarks/structure/benchmark_pdb.py×8.4
77.3 ms9.2 ms
benchmark_get_coord
benchmarks/structure/benchmark_pdb.py×7.2
4,234.1 µs587 µs
benchmark_partial_charges
benchmarks/structure/benchmark_charges.py×5.1
732.9 µs143.5 µs
benchmark_get_structure
benchmarks/structure/benchmark_pdb.py×5
20.2 ms4 ms
benchmark_get_remark
benchmarks/structure/benchmark_pdb.py×4.4
757.9 µs171.2 µs
benchmark_bond_list_creation
benchmarks/structure/benchmark_bonds.py×3
815.7 µs269.1 µs
benchmark_set_structure
benchmarks/structure/benchmark_pdb.py×3
34.3 ms11.4 ms
benchmark_set_structure_with_bonds
benchmarks/structure/benchmark_pdb.py×3
34.2 ms11.5 ms
benchmark_cell_list_creation
benchmarks/structure/benchmark_celllist.py×2.8
941.6 µs338.5 µs
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py×2.4
81.4 ms33.8 ms
benchmark_get_bonds
benchmarks/structure/benchmark_bonds.py×2.1
15.3 ms7.2 ms
benchmark_read
benchmarks/structure/benchmark_pdb.py+71%
3.5 ms2 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py+60%
124.5 ms77.8 ms
benchmark_concatenate
benchmarks/structure/benchmark_bonds.py+55%
320.1 µs206.4 µs
benchmark_get_all_bonds
benchmarks/structure/benchmark_bonds.py+23%
184.8 µs150.8 µs
benchmark_conversion[get_all_bonds]
benchmarks/structure/benchmark_bonds.py+21%
181.1 µs149.8 µs
benchmark_encode
benchmarks/sequence/benchmark_alphabet.py+17%
183.1 µs156.6 µs
benchmark_sasa
benchmarks/structure/benchmark_sasa.py+12%
248.7 ms221.6 ms
benchmark_conversion[bond_type_matrix]
benchmarks/structure/benchmark_bonds.py+10%
1.4 ms1.3 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+10%
110 ms100 ms
benchmark_cell_list_compute_contacts[MASK]
benchmarks/structure/benchmark_celllist.pyN/A
N/A19.7 ms
benchmark_cell_list_compute_contacts[MAPPING]
benchmarks/structure/benchmark_celllist.pyN/A
N/A18.5 ms
benchmark_cell_list_compute_contacts[PAIRS]
benchmarks/structure/benchmark_celllist.pyN/A
N/A18.4 ms
Commits
Click on a commit to change the comparison rangeBase
main
2e5ef85
-54.28%
Make order of `BondType` enum member deterministic
845510e
6 days ago
by padix-key