GitHub Actions run on branch pre-commit-ci-update-config - sourmash-bio/sourmash

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CPU Simulation

13 days ago 8a065f1 pre-commit-ci-update-config pull_request

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[pre-commit.ci] pre-commit autoupdate

#3860

pre-commit-ci-update-config

13 days ago

CPU Simulation

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Suggested base runs: •

Benchmarks

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.1 ms

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.1 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

401 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

10.5 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

401 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash

12.1 ms

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

911.9 µs

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

1.3 ms

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

93.3 µs

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

400.9 ms

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

9.5 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash

14.7 ms

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

676.8 µs

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

8.2 ms

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

891.9 µs

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

401.3 ms

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

189.3 µs

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

18.8 µs

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.1 ms

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

16.3 µs

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

695 µs

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