GitHub Actions run on branch update_compare_output_help - sourmash-bio/sourmash

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CPU Simulation

10 days ago 15532d7 update_compare_output_help pull_request

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MRG: update the argparse and doc info for 'compare'

#3841

update_compare_output_help

10 days ago

CPU Simulation

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Benchmarks

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

915.5 µs

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.4 ms

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

9.5 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

10.7 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

403.6 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

8.2 ms

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

93.3 µs

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

189.2 µs

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

403 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

403.1 ms

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

676.9 µs

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

697.1 µs

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

893.5 µs

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

1.4 ms

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

16.2 µs

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

403.1 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash

18.4 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.4 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash

18.5 ms

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

18.8 µs

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.4 ms

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