GitHub Actions run on branch dependabot/github_actions/actions/setup-python-6 - sourmash-bio/sourmash

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Instrumentation

7 hours ago fbdba57 dependabot/github_actions/actions/setup-python-6 pull_request

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Build(ci): Bump actions/setup-python from 5 to 6

#3807

dependabot/github_actions/actions/setup-python-6

7 hours ago

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Benchmarks

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save compressed nodegraph

1.4 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::force with valid kmers

403.1 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size btree

18.4 ms

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence::valid

14.4 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size

8.2 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection btree

18.5 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::force with valid kmers

14.4 ms

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection_size

16.3 µs

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::invalid kmers

10.7 ms

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci1

696.8 µs

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::valid

403.1 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence::lowercase

14.4 ms

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci1

915.2 µs

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::lowercase

403.2 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::invalid kmers

403.5 ms

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci0

893.5 µs

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::load nodegraph

189.4 µs

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection

18.8 µs

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save nodegraph

93.3 µs

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci0

676.8 µs

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection

9.5 ms

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