GitHub Actions run on branch try-skipmers - sourmash-bio/sourmash

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run

Base runon

latest

74f5104

compared to head run on

try-skipmers

11978ed

from

3 days ago

IMPROVEMENTS: 0

REGRESSIONS: 0

UNTOUCHED: 21

NEW: 0

DROPPED: 0

IGNORED: 0

Benchmarks

Passed

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence::valid

14.2 ms

14.1 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::force with valid kmers

14.2 ms

14.1 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence::lowercase

14.2 ms

14.1 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::lowercase

401.9 ms

400.5 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::valid

402 ms

400.6 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::force with valid kmers

402 ms

400.7 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::invalid kmers

402.5 ms

401.1 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::invalid kmers

10.5 ms

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::load nodegraph

187.3 µs

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci0

717.1 µs

717 µs

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci0

938.5 µs

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection btree

19.4 ms

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci1

960.1 µs

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection

20.3 µs

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection_size

18.3 µs

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection

10.6 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size

9.3 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size btree

19 ms

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save compressed nodegraph

1.4 ms

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci1

736.8 µs

737 µs

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save nodegraph

93.1 µs

93.2 µs

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