lirber/remove_match_ - Branch - sourmash-bio/sourmash

remove match_

#3351

Comparing

lirber/remove_match_

(

06867ac

) with

latest

(

11cab80

)

-2%

Improvements: 0

Regressions: 0

Untouched: 21

New: 0

Dropped: 0

Ignored: 0

Benchmarks

Passed

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence::lowercase

14.2 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection btree

19.4 ms

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection

20.3 µs

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection_size

18.3 µs

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection

10.6 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size

9.3 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size btree

19 ms

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence::valid

14.2 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::lowercase

401.9 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::invalid kmers

402.5 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::force with valid kmers

402 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::valid

402 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::force with valid kmers

14.2 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::invalid kmers

10.5 ms

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save compressed nodegraph

1.4 ms

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::load nodegraph

187.3 µs

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save nodegraph

93.2 µs

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci1

-7%

960.2 µs

1,034.7 µs

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci0

-8%

938.7 µs

1,015.4 µs

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci1

-9%

737 µs

811.7 µs

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci0

-10%

717.2 µs

793.9 µs

Commits

Click on a commit to change the comparison range

Base

latest

11cab80

-2%

remove match_

4841d43

3 months ago

by luizirber

remove match_ from mem revindex gather, still working on FFI

06867ac

2 months ago

by luizirber

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