lirber/simd_json - Branch - sourmash-bio/sourmash

Replace serde_json with simd_json

#3174

Comparing

lirber/simd_json

(

a35e64b

) with

latest

(

b69c960

)

-1%

Improvements: 0

Regressions: 0

Untouched: 21

New: 0

Dropped: 0

Ignored: 0

Benchmarks

Passed

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::invalid kmers

+1%

10.5 ms

10.3 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence::lowercase

+1%

14.2 ms

14 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence::force with valid kmers

+1%

14.2 ms

14 ms

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence::valid

+1%

14.2 ms

14 ms

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection

10.6 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::lowercase

401.9 ms

400.5 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::force with valid kmers

402 ms

400.6 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::valid

402 ms

400.7 ms

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::invalid kmers

402.4 ms

401.1 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection btree

19.4 ms

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection_size

18.3 µs

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::load nodegraph

187.3 µs

187.2 µs

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size btree

19 ms

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save compressed nodegraph

1.4 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size

9.3 ms

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save nodegraph

93.3 µs

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash::intersection

20.2 µs

20.3 µs

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci0

-3%

716.9 µs

737.5 µs

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci1

-4%

736.5 µs

769.8 µs

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci1

-6%

959.9 µs

1,017 µs

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci0

-6%

938.5 µs

995.2 µs

Commits

Click on a commit to change the comparison range

Base

latest

b69c960

-1%

use simd_json instead of serde_json

a35e64b

5 days ago

by luizirber

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