lirber/rocksdb-lib - Branch - sourmash-bio/sourmash

build: use packaged rocksdb instead of recompiling for dev

#3939Merged

Comparing

lirber/rocksdb-lib

(

1a5de13

) with

latest

(

228aab7

)

Untouched: 21

Benchmarks

21 total

invalid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

10.7 ms10.7 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.3 ms14.3 ms

valid

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.3 ms14.3 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence::add_sequence

14.3 ms14.3 ms

intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

16.2 µs16.2 µs

large intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

9.5 ms9.5 ms

force with valid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

407.8 ms407.8 ms

large intersection btree

src/core/benches/minhash.rs::minhash::intersection::minhash

14.7 ms14.7 ms

save compressed nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

1.7 ms1.7 ms

save nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

127.1 µs127.1 µs

invalid kmers

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

408.2 ms408.2 ms

large intersection_size

src/core/benches/minhash.rs::minhash::intersection::minhash

8.2 ms8.2 ms

lowercase

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

407.7 ms407.7 ms

large intersection_size btree

src/core/benches/minhash.rs::minhash::intersection::minhash

12 ms12 ms

valid

src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein

407.8 ms407.8 ms

load nodegraph

src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph

189.5 µs189.5 µs

intersection

src/core/benches/minhash.rs::minhash::intersection::minhash

18.8 µs18.8 µs

abund1_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

908.4 µs908.5 µs

abund1_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

889.8 µs889.9 µs

abund0_ani_ci1

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

693.9 µs694 µs

abund0_ani_ci0

src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats

676.4 µs676.5 µs

Commits

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Base

latest

228aab7

build: use packaged rocksdb instead of recompiling for dev

0b4b846

20 days ago

by luizirber

use for nix too

1a5de13

20 days ago

by luizirber

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