Avatar for the sourmash-bio user
sourmash-bio
sourmash
BlogDocsChangelog

MRG: update sourmash core to r0.15.2

#3338Merged
Comparing
bump_r0.15.2
(
e7f2f0e
) with
latest
(
d63c464
)
CodSpeed Performance Gauge
0%
Improvements
0
Regressions
0
Untouched
21
New
0
Dropped
0
Ignored
0

Benchmarks

Passed

intersection_size
src/core/benches/minhash.rs::minhash::intersection::minhash::intersection_size
CodSpeed Performance Gauge
0%
15.4 µs
15.3 µs
intersection
src/core/benches/minhash.rs::minhash::intersection::minhash::intersection
CodSpeed Performance Gauge
0%
18.2 µs
18.2 µs
abund0_ani_ci1
src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci1
CodSpeed Performance Gauge
0%
581.4 µs
581.4 µs
large intersection_size btree
src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size btree
CodSpeed Performance Gauge
0%
18.2 ms
18.2 ms
abund1_ani_ci1
src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci1
CodSpeed Performance Gauge
0%
809.7 µs
809.7 µs
save compressed nodegraph
src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save compressed nodegraph
CodSpeed Performance Gauge
0%
1.4 ms
1.4 ms
large intersection btree
src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection btree
CodSpeed Performance Gauge
0%
18.3 ms
18.3 ms
large intersection
src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection
CodSpeed Performance Gauge
0%
9.1 ms
9.1 ms
large intersection_size
src/core/benches/minhash.rs::minhash::intersection::minhash::large intersection_size
CodSpeed Performance Gauge
0%
7.5 ms
7.5 ms
lowercase
src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::lowercase
CodSpeed Performance Gauge
0%
399.1 ms
399.1 ms
invalid kmers
src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::invalid kmers
CodSpeed Performance Gauge
0%
399.6 ms
399.6 ms
force with valid kmers
src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::force with valid kmers
CodSpeed Performance Gauge
0%
399.2 ms
399.2 ms
valid
src/core/benches/compute.rs::compute::add_sequence_protein::add_sequence_protein::valid
CodSpeed Performance Gauge
0%
399.2 ms
399.2 ms
abund0_ani_ci0
src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund0_ani_ci0
CodSpeed Performance Gauge
0%
560.6 µs
560.6 µs
valid
src/core/benches/compute.rs::compute::add_sequence::add_sequence::valid
CodSpeed Performance Gauge
0%
14 ms
14 ms
force with valid kmers
src/core/benches/compute.rs::compute::add_sequence::add_sequence::force with valid kmers
CodSpeed Performance Gauge
0%
14 ms
14 ms
lowercase
src/core/benches/compute.rs::compute::add_sequence::add_sequence::lowercase
CodSpeed Performance Gauge
0%
14 ms
14 ms
invalid kmers
src/core/benches/compute.rs::compute::add_sequence::add_sequence::invalid kmers
CodSpeed Performance Gauge
0%
10.4 ms
10.4 ms
abund1_ani_ci0
src/core/benches/gather.rs::gather::gather_stats_benchmarks::gather_stats::abund1_ani_ci0
CodSpeed Performance Gauge
0%
787.1 µs
787.2 µs
load nodegraph
src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::load nodegraph
CodSpeed Performance Gauge
0%
187.1 µs
187.1 µs
save nodegraph
src/core/benches/nodegraph.rs::nodegraph::save_load::nodegraph::save nodegraph
CodSpeed Performance Gauge
0%
93.1 µs
93.1 µs

Commits

Click on a commit to change the comparison range
Base
latest
d63c464
0%
update sourmash core to r0.15.2
e7f2f0e
3 months ago
by ctb
Home Terms PrivacyDocs