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#875
padix-key:benchmark
25 days ago
CPU Simulation
98 total
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py544.1 µs
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.2 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py544.8 µs
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py495.5 µs
benchmark_get_bonds
benchmarks/structure/benchmark_bonds.py15.5 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py542.3 µs
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py459.4 µs
benchmark_cell_list_compute_contacts
benchmarks/structure/benchmark_celllist.py11.6 ms
benchmark_cell_list_creation
benchmarks/structure/benchmark_celllist.py941.5 µs
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.2 ms
benchmark_match_kmer_selection[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py461.5 µs
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.3 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py317.8 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py311.7 ms
benchmark_partial_charges
benchmarks/structure/benchmark_charges.py731.4 µs
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py13.4 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py322.7 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py1.9 s
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py12.9 ms
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py885 ms
benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.2 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py15.2 ms
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py15.1 ms