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CPU Simulation
19 days ago 2018578 main pushCompare
Suggested base runs:
63 total
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.2 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.1 ms
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.2 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py7 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.1 ms
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py14.5 ms
benchmark_indexing_from_kmers[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py13.2 ms
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.6 ms
benchmark_get_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py58.7 ms
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py13.3 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.5 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py10 ms
benchmark_match[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py574.3 µs
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py310.8 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py124.5 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py81.5 ms
benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py17.6 ms
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py491.7 µs
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py1.9 s
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py148.7 µs
benchmark_compress
benchmarks/structure/benchmark_pdbx.py697.9 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py200.8 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py324 ms