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CPU Simulation
7 days ago f29c22d main pushCompare
Suggested base runs:
63 total
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py7.4 ms
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py2 s
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.1 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.1 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py2 s
benchmark_compress
benchmarks/structure/benchmark_pdbx.py698.5 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py7.4 ms
benchmark_get_sequences[fasta_path0-NucleotideSequence]
benchmarks/sequence/benchmark_fasta.py185 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py7 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py106.2 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py323.2 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py81.2 ms
benchmark_get_sequences[fasta_path1-ProteinSequence]
benchmarks/sequence/benchmark_fasta.py8.8 ms
test_pickle_and_unpickle[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py38.9 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py10 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py110.4 ms
benchmark_get_assembly
benchmarks/structure/benchmark_pdbx.py663.8 ms
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py8 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py1.9 s
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py884.9 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py311.2 ms
benchmark_get_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py18.4 ms
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py1.9 s