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16 days ago b806569 padix-key:sponsor-logo pull_requestCompare
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padix-key:sponsor-logo
16 days ago
CPU Simulation
63 total
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py13.3 ms
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.2 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.1 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py9.1 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py9.9 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py12.3 ms
benchmark_get_sequences[fasta_path1-ProteinSequence]
benchmarks/sequence/benchmark_fasta.py8.8 ms
benchmark_lddt[False-all]
benchmarks/structure/benchmark_compare.py225.7 ms
benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py10.1 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py124.5 ms
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py2.4 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py7 ms
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py884.9 ms
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py14.5 ms
benchmark_indexing_from_kmers[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py13.2 ms
benchmark_set_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py128.3 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py1.9 s
benchmark_set_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py104.3 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py323 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py311.1 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py699.7 ms
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py29.8 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py106 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py200.9 ms