Comparing
padix-key:print-options
(bc103c8
) withmain
(89e450e
)0%
- Untouched
- 59
Benchmarks
59 total
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py-1%
151.9 µs153.7 µs
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py+1%
8.1 ms8 ms
benchmark_superimpose[superimpose_without_outliers]
benchmarks/structure/benchmark_superimpose.py+1%
17.4 ms17.3 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py0%
6.5 ms6.4 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
312.6 ms313.7 ms
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py0%
30 ms29.9 ms
benchmark_superimpose[superimpose_structural_homologs]
benchmarks/structure/benchmark_superimpose.py0%
32.5 ms32.5 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
125.8 ms126.1 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
106.8 ms107 ms
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
537.5 µs538.4 µs
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
10.4 ms10.4 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
201.4 ms201.7 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py0%
325.6 ms325.1 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
320.2 ms319.8 ms
benchmark_superimpose[superimpose_homologs]
benchmarks/structure/benchmark_superimpose.py0%
24.2 ms24.2 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
542.9 µs543.5 µs
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py0%
2.5 ms2.5 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py0%
112.1 ms112 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.3 ms9.3 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py0%
81.5 ms81.6 ms
benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
620.7 µs621.1 µs
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_match_kmer_selection[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
462.2 µs461.9 µs
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
Commits
Click on a commit to change the comparison rangeBase
main
89e450e
0%
Abbreviate printed `AtomArray` and `AtomArrayStack`
bc103c8
10 months ago
by padix-key