Comparing
padix-key:pdbx-next-gen
(ad3fa31
) withmain
(1d906ba
)-16%
- Improvement
- 1
- Regression
- 3
- Untouched
- 55
Benchmarks
59 total
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py+48%
11.6 ms7.9 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py-14%
92 ms107.6 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py-13%
176.3 ms203.5 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py-16%
570.4 ms678.8 ms
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+2%
15.3 ms14.9 ms
benchmark_set_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py+2%
107.8 ms105.6 ms
test_pickle_and_unpickle[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
38.9 ms38.8 ms
test_pickle_and_unpickle[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
39 ms38.9 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.5 ms9.5 ms
benchmark_lddt[False-all]
benchmarks/structure/benchmark_compare.py0%
217.5 ms217.1 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
546 µs545.2 µs
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
298.9 ms298.5 ms
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
13 ms13 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
547 µs546.4 µs
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py0%
908.9 ms907.9 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
13.3 ms13.3 ms
benchmark_set_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
129.6 ms129.5 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
7.3 ms7.3 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.7 ms12.7 ms
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
14.2 ms14.2 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_lddt[True-chain]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
Commits
Click on a commit to change the comparison rangeBase
main
1d906ba
-15.97%
Fix deletion of categories
ad3fa31
11 months ago
by padix-key