Fix #856
#858Comparing
padix-key:issue-856
(c13f31f
) withmain
(f29c22d
)0%
- Untouched
- 63
Benchmarks
63 total
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
106.2 ms105.8 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
15.1 ms15 ms
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py0%
2.5 ms2.5 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py0%
7 ms7 ms
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
540.7 µs539.7 µs
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
458.2 µs457.7 µs
benchmark_match[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
574.1 µs573.5 µs
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
10 ms9.9 ms
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
13.3 ms13.3 ms
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
13 ms13 ms
benchmark_indexing_from_kmers[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
13.2 ms13.2 ms
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.6 ms12.6 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.3 ms12.3 ms
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
14.5 ms14.5 ms
benchmark_get_a3m_alignments
benchmarks/sequence/benchmark_fasta.py0%
576.3 ms576.2 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
124.3 ms124.3 ms
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
184.6 µs184.6 µs
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.3 ms12.3 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
539.7 µs539.7 µs
benchmark_get_assembly
benchmarks/structure/benchmark_pdbx.py0%
663.8 ms663.8 ms
benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
17.6 ms17.6 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
317.9 ms317.9 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
Commits
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main
f29c22d
-0.06%
Fix #856
c13f31f
2 days ago
by padix-key