Resolve #855
#857Comparing
padix-key:issue-855
(37a7912
) withmain
(f29c22d
)0%
- Untouched
- 63
Benchmarks
63 total
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py+1%
2.5 ms2.4 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.5 ms9.4 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py0%
7 ms7 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
15.1 ms15 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
539.7 µs538.2 µs
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
106.2 ms106 ms
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
458.2 µs457 µs
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
201.1 ms200.7 ms
benchmark_superimpose[superimpose_homologs]
benchmarks/structure/benchmark_superimpose.py0%
28.4 ms28.3 ms
benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
624.2 µs623.3 µs
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
13.3 ms13.3 ms
benchmark_indexing_from_kmers[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
13.2 ms13.2 ms
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
540.7 µs540 µs
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_match[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
574.1 µs573.4 µs
benchmark_get_a3m_alignments
benchmarks/sequence/benchmark_fasta.py0%
576.3 ms575.7 ms
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
10.2 ms10.2 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py0%
110.4 ms110.3 ms
benchmark_serialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py0%
111.7 ms111.6 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.1 ms9.1 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.3 ms12.3 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.3 ms12.3 ms
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.6 ms12.6 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py0%
698.5 ms698.2 ms
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
184.6 µs184.5 µs
Commits
Click on a commit to change the comparison rangeBase
main
f29c22d
+0.02%
Resolve #855
37a7912
2 days ago
by padix-key