Comparing
padix-key:issue-838
(cc26b63
) withmain
(72616d2
)0%
- Untouched
- 59
- New
- 1
Benchmarks
60 total
benchmark_get_assembly
benchmarks/structure/benchmark_pdbx.pyN/A
N/A914.4 ms
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py+2%
151.3 µs148.1 µs
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+1%
112.1 ms110.7 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py+1%
9.6 ms9.5 ms
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py+1%
2.5 ms2.5 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py+1%
702.2 ms697.6 ms
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py+1%
495.1 µs492.3 µs
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py+1%
325.5 ms323.8 ms
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
15 ms15 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
544.6 µs542.6 µs
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
185.3 µs184.8 µs
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.6 ms12.6 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
312.1 ms311.6 ms
benchmark_match[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
574.1 µs573.5 µs
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
318.7 ms318.5 ms
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
459.6 µs459.5 µs
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.3 ms
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_lddt[True-chain]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py0%
882.6 ms882.7 ms
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
10.3 ms10.3 ms
Commits
Click on a commit to change the comparison rangeBase
main
72616d2
-0.3%
fixup! Add benchmark for `get_assembly()`
36b988c
5 months ago
by padix-key-0.03%
Fix #838
cc26b63
5 months ago
by padix-key