Comparing
padix-key:issue-831
(fce71c6
) withmain
(f8b40d2
)0%
- Untouched
- 59
Benchmarks
59 total
benchmark_get_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py+7%
19.6 ms18.3 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+6%
118.5 ms112.1 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py-4%
675 ms704 ms
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py-4%
7.8 ms8.1 ms
benchmark_serialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py-4%
106.9 ms110.9 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py+2%
83.7 ms81.8 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py+2%
6.6 ms6.5 ms
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py-2%
29.6 ms30.1 ms
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py-1%
151.8 µs153.3 µs
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py-1%
459.8 µs462.8 µs
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
107 ms107.5 ms
benchmark_superimpose[superimpose_homologs]
benchmarks/structure/benchmark_superimpose.py0%
24.1 ms24.2 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
125.8 ms126.3 ms
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
493.3 µs495.2 µs
benchmark_set_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py0%
104.4 ms104.8 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.3 ms9.3 ms
benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
10.3 ms10.3 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
313.6 ms312.6 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.3 ms9.4 ms
benchmark_get_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py0%
59.7 ms59.9 ms
benchmark_superimpose[superimpose_structural_homologs]
benchmarks/structure/benchmark_superimpose.py0%
32.5 ms32.6 ms
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
10.3 ms10.4 ms
benchmark_lddt[False-all]
benchmarks/structure/benchmark_compare.py0%
226.8 ms227.4 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
319.7 ms318.9 ms
benchmark_superimpose[superimpose]
benchmarks/structure/benchmark_superimpose.py0%
2.5 ms2.5 ms
Commits
Click on a commit to change the comparison rangeBase
main
f8b40d2
-0.07%
Improve compression of short float arrays
1755311
10 months ago
by padix-key+0.08%
Extend docstring
cac899e
10 months ago
by padix-key-0.11%
Fix parsing of Uniprot ID from input ID
fce71c6
10 months ago
by padix-key