Comparing
padix-key:issue-831
(fce71c6
) withmain
(f8b40d2
)0%
- Untouched
- 59
Benchmarks
59 total
benchmark_get_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py+7%
19.6 ms18.3 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+6%
118.5 ms112.1 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py+2%
83.7 ms81.8 ms
benchmark_structural_alphabet_methods[to_protein_blocks]
benchmarks/structure/benchmark_alphabet.py+2%
6.6 ms6.5 ms
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
313.6 ms312.6 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
319.7 ms318.9 ms
test_pickle_and_unpickle[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
38.9 ms38.8 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
15.1 ms15.1 ms
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
17.3 ms17.3 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.6 ms9.6 ms
benchmark_lddt[True-atom]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
14.2 ms14.2 ms
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.6 ms12.7 ms
benchmark_lddt[True-all]
benchmarks/structure/benchmark_compare.py0%
882.2 ms882.5 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py0%
325 ms325.1 ms
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
2 s2 s
benchmark_lddt[True-chain]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_lddt[True-residue]
benchmarks/structure/benchmark_compare.py0%
1.9 s1.9 s
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
185.8 µs185.9 µs
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
test_pickle_and_unpickle[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
38.9 ms39 ms
Commits
Click on a commit to change the comparison rangeBase
main
f8b40d2
-0.07%
Improve compression of short float arrays
1755311
6 months ago
by padix-key+0.08%
Extend docstring
cac899e
6 months ago
by padix-key-0.11%
Fix parsing of Uniprot ID from input ID
fce71c6
6 months ago
by padix-key