Comparing
padix-key:entity-id-annotation
(a8c23e2
) withmain
(2315f2a
)0%
- Untouched
- 98
Benchmarks
98 total
benchmark_read
benchmarks/structure/benchmark_pdb.py+1%
3.6 ms3.5 ms
benchmark_conversion[as_set]
benchmarks/structure/benchmark_bonds.py+1%
863.7 µs858.8 µs
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py0%
30.5 ms30.4 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
106 ms105.5 ms
benchmark_connect[connect_via_residue_names]
benchmarks/structure/benchmark_bonds.py0%
50.8 ms50.6 ms
benchmark_get_sequences[fasta_path0-NucleotideSequence]
benchmarks/sequence/benchmark_fasta.py0%
184.6 ms183.9 ms
benchmark_similar_kmers
benchmarks/sequence/align/benchmark_kmer.py0%
319.3 µs318.4 µs
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
310.8 ms310.1 ms
benchmark_lddt[False-chain]
benchmarks/structure/benchmark_compare.py0%
317.5 ms316.9 ms
benchmark_lddt[False-residue]
benchmarks/structure/benchmark_compare.py0%
322.8 ms322.2 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
124.7 ms124.5 ms
benchmark_get_structure_with_bonds
benchmarks/structure/benchmark_pdb.py0%
77.5 ms77.4 ms
benchmark_concatenate
benchmarks/structure/benchmark_bonds.py0%
317.3 µs316.8 µs
benchmark_set_structure
benchmarks/structure/benchmark_pdb.py0%
34.3 ms34.2 ms
benchmark_bond_list_creation
benchmarks/structure/benchmark_bonds.py0%
822.9 µs821.7 µs
benchmark_get_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py0%
58.5 ms58.4 ms
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
458.4 µs457.7 µs
benchmark_set_structure_with_bonds
benchmarks/structure/benchmark_pdb.py0%
34.2 ms34.2 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py0%
81.7 ms81.6 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py0%
699.5 ms698.7 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
10 ms9.9 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.2 ms9.2 ms
benchmark_get_a3m_alignments
benchmarks/sequence/benchmark_fasta.py0%
577.8 ms577.4 ms
benchmark_conversion[as_graph]
benchmarks/structure/benchmark_bonds.py0%
8.7 ms8.7 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
Commits
Click on a commit to change the comparison rangeBase
main
2315f2a
-0.04%
Add optional `entity_id` annotation
a8c23e2
15 days ago
by padix-key