Comparing
padix-key:concatenate-atoms
(f15cf89
) withmain
(0acb143
)0%
- Untouched
- 47
Benchmarks
47 total
benchmark_match_table[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py+1%
13 ms12.9 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py+1%
114.5 ms113.7 ms
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+1%
111.4 ms110.8 ms
benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
626.1 µs623.5 µs
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
536.3 µs534.6 µs
benchmark_set_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py0%
106.4 ms106.1 ms
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
14.9 ms14.9 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
174 ms173.8 ms
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.4 ms9.4 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.4 ms9.4 ms
benchmark_indexing_from_sequences[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.7 ms9.7 ms
benchmark_set_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
127.1 ms127.1 ms
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py0%
155 µs155 µs
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py0%
11 ms11 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
15 ms15 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
7.3 ms7.3 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.4 ms12.4 ms
benchmark_score_threshold_rule[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
2.1 s2.1 s
benchmark_score_threshold_rule[None]
benchmarks/sequence/align/benchmark_kmers.py0%
2.1 s2.1 s
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.8 ms12.8 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
7.3 ms7.3 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
137.5 ms137.5 ms
benchmark_get_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py0%
21.5 ms21.5 ms
benchmark_indexing_from_sequences[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
17.2 ms17.3 ms
Commits
Click on a commit to change the comparison rangeBase
main
0acb143
-0.03%
Support concatenation of more than two `AtomArray` objects
f15cf89
1 year ago
by padix-key