Comparing
dacarlin:add-alphafold-db
(6de1365
) withmain
(d979def
)0%
- Untouched
- 59
Benchmarks
59 total
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+2%
15.6 ms15.3 ms
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py+1%
52.2 ms51.6 ms
benchmark_get_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py+1%
75.5 ms74.8 ms
benchmark_get_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py+1%
107 ms106.2 ms
benchmark_compress
benchmarks/structure/benchmark_pdbx.py+1%
573.8 ms569.6 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py+1%
13.5 ms13.4 ms
benchmark_serialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py+1%
73.7 ms73.2 ms
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py+1%
194.2 µs193.1 µs
benchmark_indexing_from_kmers[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py+1%
9.8 ms9.7 ms
benchmark_indexing_from_kmers[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py+1%
12.2 ms12.1 ms
benchmark_indexing_from_kmers[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
9.7 ms9.7 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
550.5 µs547.9 µs
benchmark_indexing_from_kmers[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
12.2 ms12.1 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
8.9 ms8.9 ms
benchmark_indexing_from_kmer_selection[None-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
8.9 ms8.8 ms
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py0%
10.6 ms10.6 ms
benchmark_indexing_from_kmer_selection[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
11.3 ms11.3 ms
benchmark_set_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py0%
142 ms141.5 ms
benchmark_indexing_from_kmer_selection[11*11*1*1***111-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
11.4 ms11.3 ms
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
167.5 ms167 ms
benchmark_deserialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py0%
92.3 ms92 ms
benchmark_superimpose[superimpose_without_outliers]
benchmarks/structure/benchmark_superimpose.py0%
16.5 ms16.5 ms
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
13.4 ms13.4 ms
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
497.2 µs496.1 µs
benchmark_indexing_from_sequences[None-KmerTable]
benchmarks/sequence/align/benchmark_kmers.py0%
10.1 ms10.1 ms
Commits
Click on a commit to change the comparison rangeBase
main
d979def
+0.2%
Add example
6de1365
1 year ago
by padix-key