Comparing
LiudengZhang:fix/mmcif-optional-ins-code
(9309023
) withmain
(b777f30
)0%
- Untouched
- 63
Benchmarks
63 total
benchmark_match_table[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+5%
15.2 ms14.5 ms
benchmark_match_table[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py+1%
15.1 ms15 ms
benchmark_kmer_decomposition[11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py+1%
186.6 µs185 µs
benchmark_serialize_pdbx[cif]
benchmarks/structure/benchmark_pdbx.py+1%
200.4 ms199.1 ms
benchmark_set_structure[bcif-True]
benchmarks/structure/benchmark_pdbx.py+1%
30.5 ms30.3 ms
benchmark_set_structure[cif-True]
benchmarks/structure/benchmark_pdbx.py+1%
128.3 ms127.6 ms
benchmark_set_structure[cif-False]
benchmarks/structure/benchmark_pdbx.py+1%
104 ms103.5 ms
benchmark_lddt[False-all]
benchmarks/structure/benchmark_compare.py0%
227.1 ms226 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
540.6 µs538.8 µs
benchmark_set_structure[bcif-False]
benchmarks/structure/benchmark_pdbx.py0%
8.1 ms8 ms
benchmark_match_kmer_selection[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
460.1 µs458.6 µs
benchmark_match_kmer_selection[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
459 µs457.6 µs
benchmark_match[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
625.6 µs624.1 µs
benchmark_deserialize_pdbx[bcif]
benchmarks/structure/benchmark_pdbx.py0%
110.7 ms110.5 ms
benchmark_match_kmer_selection[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
541.4 µs540.4 µs
benchmark_match[KmerTable-None]
benchmarks/sequence/align/benchmark_kmers.py0%
492.7 µs491.9 µs
benchmark_match[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
541.5 µs540.7 µs
benchmark_lddt[False-atom]
benchmarks/structure/benchmark_compare.py0%
311 ms310.8 ms
benchmark_structural_alphabet_methods[to_3di]
benchmarks/structure/benchmark_alphabet.py0%
10 ms9.9 ms
test_pickle_and_unpickle[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
7.4 ms7.4 ms
benchmark_match[BucketKmerTable(10000)-None]
benchmarks/sequence/align/benchmark_kmers.py0%
574.3 µs574.1 µs
benchmark_match_table[BucketKmerTable(10000)-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
12.9 ms12.9 ms
test_pickle_and_unpickle[KmerTable-11*11*1*1***111]
benchmarks/sequence/align/benchmark_kmers.py0%
38.9 ms38.8 ms
benchmark_kmer_decomposition[None]
benchmarks/sequence/align/benchmark_kmers.py0%
151.2 µs151.1 µs
benchmark_indexing_from_sequences[11*11*1*1***111-BucketKmerTable(100000)]
benchmarks/sequence/align/benchmark_kmers.py0%
14.5 ms14.5 ms
Commits
Click on a commit to change the comparison rangeBase
main
b777f30
+0.11%
Handle missing pdbx_PDB_ins_code in mmCIF parser
9309023
7 days ago
by LiudengZhang