update-ome - Branch - tlambert03/nd2

feat: add `write_tiff` export to OME-TIFF, include full metadata as StructuredAnnotation

#216Merged

Comparing

update-ome

(

cffe615

) with

main

(

256ef22

)

Untouched: 13

Benchmarks

Passed

test_time_imread_dask[jonas_control002]

tests/test_codspeed.py

+6%

816.5 ms767.1 ms

test_time_all_metadata[jonas_control002]

tests/test_codspeed.py

+1%

7.8 ms7.7 ms

test_time_all_metadata[dims_p2z5t3-2c4y32x32]

tests/test_codspeed.py

37.5 ms37.4 ms

test_time_imread_dask[karl_sample_image]

tests/test_codspeed.py

1.1 s1.1 s

test_time_imread[karl_sample_image]

tests/test_codspeed.py

426.6 ms426.7 ms

test_time_imread_dask[train_TR67_Inj7_fr50]

tests/test_codspeed.py

235 ms235.1 ms

test_time_imread_dask[dims_p2z5t3-2c4y32x32]

tests/test_codspeed.py

57.5 ms57.5 ms

test_time_imread[train_TR67_Inj7_fr50]

tests/test_codspeed.py

74.3 ms74.4 ms

test_time_all_metadata[train_TR67_Inj7_fr50]

tests/test_codspeed.py

36.8 ms36.9 ms

test_time_imread[jonas_control002]

tests/test_codspeed.py

58.3 ms58.5 ms

test_time_all_metadata[karl_sample_image]

tests/test_codspeed.py

63.8 ms64.1 ms

test_time_all_metadata[aryeh_but3_cont200-1]

tests/test_codspeed.py

-1%

19 ms19.1 ms

test_time_imread[dims_p2z5t3-2c4y32x32]

tests/test_codspeed.py

-1%

32.8 ms33.1 ms

Commits

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Base

main

256ef22

+0.17%

remove breakpoint

6c84b00

2 years ago

by tlambert03

-0.02%

working well

09f6f6b

2 years ago

by tlambert03

-0.03%

cleanup

f3c3920

2 years ago

by tlambert03

-0.11%

public exports

2002674

2 years ago

by tlambert03

+0.17%

future import

c17fb89

2 years ago

by tlambert03

-1.54%

test more things

124b04d

2 years ago

by tlambert03

+1.62%

docs

f2f910d

2 years ago

by tlambert03

+0.38%

style(pre-commit.ci): auto fixes [...]

aa42cc6

2 years ago

by pre-commit-ci[bot]

-0.23%

Merge branch 'update-ome' of https://github.com/tlambert03/nd2 into update-ome

b3ace84

2 years ago

by tlambert03

-0.04%

unify changes

7012866

2 years ago

by tlambert03

+0.02%

force tst

cffe615

2 years ago

by tlambert03

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